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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014632.1_44465_44695_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44465 - 44695

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCACC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCCTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

TTTGTTGCAATC

Flanking Amino Acid:

TERGYSFVTTAEREIVRDIK

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.7

41.3

Major BPS

71.2

0.53

37.5

Major PPT

69.1

0.43

0.9

64.1

31.2

Minor 5ss

40.2

-1.1

2.8

45.4

42.5

Minor BPS

-0.4

2.1

61.08

39.5

Associated Gene:

Gene:

ACTA1

Ensembl Gene ID:

ENSAPLG00000004146

Chromosome:

PEDO01014632.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004261

43554 - 45445

1892