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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014643.1_724_1001_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

724 - 1001

Intron Length:

278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTCTCTTTT

5'SS Class:

weak_minor

3'SS Sequence:

GGGAGATGCTCAG|C

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

GTTTGCTTATGT

Flanking Amino Acid:

EGSDPWRWCNGPLTSPSATL

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.9

0.07

1.4

62.3

44.7

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

49.5

-0

1.1

46.6

Minor 5ss

59.6

0.33

2.1

67.4

43.7

Minor BPS

50.6

0.1

2.3

76.39

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030049

Chromosome:

PEDO01014643.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018927

58 - 1158

1101