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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014672.1_1762_2308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1762 - 2308

Intron Length:

547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTTCTCATCC

Flanking Amino Acid:

YLSQQLALHQAVHIPGLGTF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.6

33.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

86.1

0.81

0.8

84.1

30.8

Minor 5ss

32.5

-2

3.3

47.4

Minor BPS

56.4

0.18

1.8

69.92

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016748

Chromosome:

PEDO01014672.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040842

920 - 7818

6899