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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014672.1_5759_6273_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5759 - 6273

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACTC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTCAC

U12 Branch Point Sequence:

CTCTGGTCACCT

Flanking Amino Acid:

RKAQKTERHASKLPAIQGSS

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

35.2

Major BPS

59.8

0.24

1.3

63.1

44.5

Major PPT

83.1

0.74

0.9

77.1

37.1

Minor 5ss

31.1

-2.2

3.2

41.7

Minor BPS

38.8

-0.7

2.6

59.08

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016748

Chromosome:

PEDO01014672.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040842

920 - 7818

6899