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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014675.1_3913_4400_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3913 - 4400

Intron Length:

488

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTA|GCTAGCAGT

5'SS Class:

weak_major

3'SS Sequence:

GCCTCTTGCAGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

GGATGTTGAAGA

Flanking Amino Acid:

ALCLVETVTGYVAQGRCTGH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.9

0.07

1.4

44.5

Major BPS

0.55

1.1

63.4

44.3

Major PPT

48.6

-0

1.7

55.6

Minor 5ss

-2.4

3.8

43.3

38.8

Minor BPS

43.2

-0.5

50.49

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025729

Chromosome:

PEDO01014675.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021809

1699 - 4504

2806