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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014743.1_1480_1569_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1480 - 1569

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGGGCA

5'SS Class:

major

3'SS Sequence:

TTGCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTGAC

U12 Branch Point Sequence:

AACGCCGTGACG

Flanking Amino Acid:

RKITVPGNFQGHSGAQCITC

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

62.8

37.7

Major BPS

48.6

-0

1.2

40.4

Major PPT

71.5

0.48

0.8

62.4

34.6

Minor 5ss

23.6

-3

3.2

21.4

37.4

Minor BPS

45.6

-0.4

2.2

49.22

44.8

Associated Gene:

Gene:

SSRP1

Ensembl Gene ID:

ENSAPLG00000015619

Chromosome:

PEDO01014743.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016330

52 - 4360

4309