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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014743.1_368_555_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

368 - 555

Intron Length:

188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCGT

5'SS Class:

strong_major

3'SS Sequence:

TGGCCCCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

GGGTTCTCACCC

Flanking Amino Acid:

GWNWGTVRFGGQLLSFDIGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

77.8

38.7

Major BPS

0.87

0.8

85.6

Major PPT

65.1

0.34

58.1

38.4

Minor 5ss

30.5

-2.2

2.9

41.4

Minor BPS

47.6

-0.2

1.8

55.69

42.5

Associated Gene:

Gene:

SSRP1

Ensembl Gene ID:

ENSAPLG00000015619

Chromosome:

PEDO01014743.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016330

52 - 4360

4309