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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014767.1_1406_1481_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1406 - 1481

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGCTG

5'SS Class:

major

3'SS Sequence:

CTTTCCCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCACAC

U12 Branch Point Sequence:

CCCCCCACACCC

Flanking Amino Acid:

GSVGSIFMSAAFQFSYTALF

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

64.5

46.9

Major BPS

47.2

-0.1

52.2

32.7

Major PPT

83.7

0.76

0.7

77.7

24.2

Minor 5ss

33.3

-1.9

3.6

46.8

48.5

Minor BPS

40.1

-0.7

1.9

44.72

43.4

Associated Gene:

Gene:

RCE1

Ensembl Gene ID:

ENSAPLG00000023570

Chromosome:

PEDO01014767.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037633

440 - 3257

2818