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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014767.1_1764_3152_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1764 - 3152

Intron Length:

1389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGCTGCTC

5'SS Class:

weak_major

3'SS Sequence:

CCCGCGCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTGGT

U12 Branch Point Sequence:

TCGGCCTCGGCC

Flanking Amino Acid:

RALLPCYLLGLLLAELDHVV

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.6

0.13

1.1

47.8

42.6

Major BPS

26.2

-1.5

4.1

47.8

Major PPT

65.6

0.35

0.9

57.1

33.4

Minor 5ss

28.4

-2.5

3.5

32.8

42.4

Minor BPS

37.1

-1

3.5

53.26

45.1

Associated Gene:

Gene:

RCE1

Ensembl Gene ID:

ENSAPLG00000023570

Chromosome:

PEDO01014767.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037633

440 - 3257

2818