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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014767.1_597_1077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

597 - 1077

Intron Length:

481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

TCCGTGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGGCAG

U12 Branch Point Sequence:

CCCTCCGTGCCC

Flanking Amino Acid:

RWLDGVKGALDPRLWALCLG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.7

46.2

Major BPS

37.4

-0.7

1.7

42.8

49.4

Major PPT

68.1

0.41

0.9

61.2

35.1

Minor 5ss

28.2

-2.5

3.4

29.1

43.5

Minor BPS

36.3

-1

3.7

52.61

45.8

Associated Gene:

Gene:

RCE1

Ensembl Gene ID:

ENSAPLG00000023570

Chromosome:

PEDO01014767.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037633

440 - 3257

2818