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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014778.1_4238_4314_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4238 - 4314

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGTGA

5'SS Class:

major

3'SS Sequence:

CCCTGTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

TTTCCCTGTGCT

Flanking Amino Acid:

ARQLRGFPWPELEQRLRSAP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

63.1

39.7

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

71.2

0.48

0.9

64.3

36.7

Minor 5ss

31.1

-2.2

3.2

38.1

46.8

Minor BPS

42.3

-0.5

3.6

78.83

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026234

Chromosome:

PEDO01014778.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042440

1161 - 4410

3250