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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014781.1_1932_2022_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1932 - 2022

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

GCCACCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CCAGCCCTGACA

Flanking Amino Acid:

QGVLVLGQEQDTLGGGFDAT

Intron Amino Acid Position:

363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

77.9

31.9

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

62.1

0.27

0.9

53.9

30.8

Minor 5ss

30.5

-2.2

3.5

41.8

45.1

Minor BPS

48.3

-0.1

1.8

55.53

43.5

Associated Gene:

Gene:

NPTX1

Ensembl Gene ID:

ENSAPLG00000016516

Chromosome:

PEDO01014781.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042461

21 - 2667

2647