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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014782.1_2724_2883_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2724 - 2883

Intron Length:

160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGGC

5'SS Class:

major

3'SS Sequence:

TTCCCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAT

U12 Branch Point Sequence:

CCATGGGGAAGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

65.7

Major BPS

63.5

0.33

1.2

72.5

34.6

Major PPT

78.1

0.63

0.7

25.2

Minor 5ss

28.5

-2.5

3.6

41.2

45.5

Minor BPS

28.4

-1.6

2.6

34.79

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017636

Chromosome:

PEDO01014782.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034113

241 - 3528

3288