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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014794.1_1000_1181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1000 - 1181

Intron Length:

182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTGCAG

U12 Branch Point Sequence:

GCTGCTGCAGCG

Flanking Amino Acid:

GTVPFGTMVEDMGVGLAVVP

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

38.5

-0.7

1.7

47.8

Major PPT

78.7

0.65

0.7

69.6

31.2

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

36.7

-1.1

2.2

39.55

44.4

Associated Gene:

Gene:

SLC26A11

Ensembl Gene ID:

ENSAPLG00000020854

Chromosome:

PEDO01014794.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047925

21 - 3766

3746

ENSAPLT00000034024

21 - 4307

4287