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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014794.1_4681_4851_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4681 - 4851

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACGGAGC

5'SS Class:

major

3'SS Sequence:

TGCGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGGCAC

U12 Branch Point Sequence:

GCTCCTGGCACA

Flanking Amino Acid:

QLLSQANVRTGIIGKKHVGP

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

58.9

Major BPS

45.1

-0.3

1.4

52.4

43.3

Major PPT

68.9

0.43

0.9

34.8

Minor 5ss

31.1

-2.2

3.3

41.7

Minor BPS

39.2

-0.8

2.3

49.91

41.3

Associated Gene:

Gene:

SGSH

Ensembl Gene ID:

ENSAPLG00000002678

Chromosome:

PEDO01014794.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002714

4086 - 6676

2591