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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014794.1_5003_5158_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5003 - 5158

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGACGG

5'SS Class:

strong_major

3'SS Sequence:

CCCTGATCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

TCCCCCTGATCC

Flanking Amino Acid:

VRRFLQSQDTRPFFLYVAFH

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

62.5

43.9

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

67.2

0.39

0.9

57.4

37.6

Minor 5ss

25.9

-2.8

2.9

30.2

42.8

Minor BPS

-0

1.8

60.6

44.4

Associated Gene:

Gene:

SGSH

Ensembl Gene ID:

ENSAPLG00000002678

Chromosome:

PEDO01014794.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002714

4086 - 6676

2591