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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014794.1_5316_5480_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5316 - 5480

Intron Length:

165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAGCC

5'SS Class:

major

3'SS Sequence:

TTTTTCCATGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTTTTTCCATGT

Flanking Amino Acid:

PQLYRPEEVQVPPFVPDTPA

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

63.2

36.7

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

82.2

0.73

0.8

78.8

28.9

Minor 5ss

24.9

-2.9

3.3

32.9

42.4

Minor BPS

39.7

-0.7

2.1

59.65

44.3

Associated Gene:

Gene:

SGSH

Ensembl Gene ID:

ENSAPLG00000002678

Chromosome:

PEDO01014794.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002714

4086 - 6676

2591