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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014814.1_2807_2876_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2807 - 2876

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

GCCCCTCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTGATTTGAAGC

Flanking Amino Acid:

KAWRKSSRRKVMEAFEQAER

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

67.1

0.39

60.6

35.2

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

-0.1

1.7

59.01

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029759

Chromosome:

PEDO01014814.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029492

870 - 3177

2308

ENSAPLT00000025374

21 - 3177

3157