Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014827.1_2924_3192_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2924 - 3192

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCGTT

5'SS Class:

major

3'SS Sequence:

CTCCACCACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAG

U12 Branch Point Sequence:

GCTCCTGAGACT

Flanking Amino Acid:

TEKVLRDCFSRFGKIQSIRM

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

72.6

38.9

Major BPS

54.8

0.12

1.6

53.3

44.2

Major PPT

64.4

0.33

0.9

57.9

31.7

Minor 5ss

37.3

-1.4

3.6

56.2

Minor BPS

-0.4

2.2

60.65

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013566

Chromosome:

PEDO01014827.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014129

1862 - 7722

5861

ENSAPLT00000035148

1862 - 7722

5861

ENSAPLT00000021926

1862 - 7722

5861