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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014827.1_7263_7689_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

7263 - 7689

Intron Length:

427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

TTGCCCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGGCAG

U12 Branch Point Sequence:

TTGCCCTGCACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

38.5

-0.7

1.7

42.8

49.4

Major PPT

69.7

0.44

64.4

36.6

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

54.2

0.12

69.89

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013566

Chromosome:

PEDO01014827.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014129

1862 - 7722

5861