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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014837.1_1584_2153_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

1584 - 2153

Intron Length:

570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGGTTG

5'SS Class:

major

3'SS Sequence:

TGCACGCGGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTGAT

U12 Branch Point Sequence:

CCCCCCTGCACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

63.7

42.9

Major BPS

63.8

0.34

1.2

54.7

43.1

Major PPT

51.7

0.04

1.1

46.1

41.3

Minor 5ss

43.3

-0.7

3.4

65.4

45.7

Minor BPS

44.7

-0.5

45.08

46.9

Associated Gene:

Gene:

KIAA1324

Ensembl Gene ID:

ENSAPLG00000021879

Chromosome:

PEDO01014837.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017314

1463 - 9719

8257