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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014837.1_2347_3204_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2347 - 3204

Intron Length:
858

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGC|GTGAGTGGC

5'SS Class:
major

3'SS Sequence:
TCACCTGCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTGTCAC

U12 Branch Point Sequence:
TCTGTGTCACCT

Flanking Amino Acid:
SFGDTVENCTASTWVPLGDY

Intron Amino Acid Position:
54

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.6
0.32
1.3
57.5
42.3

Major BPS
57.2
0.18
1.4
63.1
44.5

Major PPT
66.5
0.37
0.9
57.5
38.3

Minor 5ss
28.5
-2.5
3.1
30
36.1

Minor BPS
41.7
-0.5
2.4
62.74
47.7

Associated Gene:

Gene:
KIAA1324

Ensembl Gene ID:

Chromosome:
PEDO01014837.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2154 - 9719
7566

1463 - 9719
8257