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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014837.1_4131_4269_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4131 - 4269

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGAGCC

5'SS Class:

major

3'SS Sequence:

CACCGCCCGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

GGGACCTCACCG

Flanking Amino Acid:

CQPCELATYAEQGSASCKVR

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

Major BPS

63.6

0.34

65.3

32.1

Major PPT

56.7

0.15

50.3

33.8

Minor 5ss

25.8

-2.8

3.1

25.9

36.5

Minor BPS

44.9

-0.5

1.9

46.23

45.7

Associated Gene:

Gene:

KIAA1324

Ensembl Gene ID:

ENSAPLG00000021879

Chromosome:

PEDO01014837.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037370

2154 - 9719

7566

ENSAPLT00000017314

1463 - 9719

8257