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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014837.1_4359_4458_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4359 - 4458

Intron Length:
100

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACAGCCC

5'SS Class:
major

3'SS Sequence:
CCTGCCTGCCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGCTCAC

U12 Branch Point Sequence:
GCCAGCTCACCC

Flanking Amino Acid:
THTACDANGETQLMFKWAEP

Intron Amino Acid Position:
246

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.4
0.44
1.1
55.4
40.1

Major BPS
61
0.28
1.1
63.1
35.8

Major PPT
65.5
0.35
1
56.8
38.7

Minor 5ss
30.3
-2.3
3.5
42.7
44.4

Minor BPS
39.7
-0.8
2.1
43.57
43.9

Associated Gene:

Gene:
KIAA1324

Ensembl Gene ID:

Chromosome:
PEDO01014837.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2154 - 9719
7566

1463 - 9719
8257