Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014837.1_5219_5286_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5219 - 5286

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCCCAC

U12 Branch Point Sequence:

GGTGTCCCACGT

Flanking Amino Acid:

SVSCELYFMVGVNSRTNTPV

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

47.8

-0.1

1.4

58.1

40.4

Major PPT

0.52

0.9

66.4

35.7

Minor 5ss

29.1

-2.4

3.2

37.3

42.5

Minor BPS

35.4

-1

2.1

49.73

43.7

Associated Gene:

Gene:

KIAA1324

Ensembl Gene ID:

ENSAPLG00000021879

Chromosome:

PEDO01014837.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037370

2154 - 9719

7566

ENSAPLT00000017314

1463 - 9719

8257