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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014837.1_5750_6163_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5750 - 6163

Intron Length:

414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACTGTC

5'SS Class:

major

3'SS Sequence:

CCCCCCCGGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

CGGTCCCTGAGT

Flanking Amino Acid:

PCGPGTHSNQVRSLCYNNCS

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

1.1

75.7

34.4

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

56.4

0.15

49.1

34.1

Minor 5ss

37.3

-1.4

3.3

45.2

Minor BPS

-0

64.44

Associated Gene:

Gene:

KIAA1324

Ensembl Gene ID:

ENSAPLG00000021879

Chromosome:

PEDO01014837.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037370

2154 - 9719

7566

ENSAPLT00000017314

1463 - 9719

8257