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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014837.1_7047_7197_F


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7047 - 7197

Intron Length:
151

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTGAGCGGA

5'SS Class:
major

3'SS Sequence:
GCTGCCATCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCATCAC

U12 Branch Point Sequence:
GCTGCCATCACA

Flanking Amino Acid:
QPVSLADRVVGVTTSPTLDG

Intron Amino Acid Position:
662

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.1
0.57
1
59.4
41.8

Major BPS
49.2
-0
1.3
53.6
41.6

Major PPT
65.9
0.36
0.9
57.6
37.3

Minor 5ss
29.8
-2.3
3.2
29
43.5

Minor BPS
47.5
-0.2
2.1
60.7
45.1

Associated Gene:

Gene:
KIAA1324

Ensembl Gene ID:

Chromosome:
PEDO01014837.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2154 - 9719
7566

1463 - 9719
8257