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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014848.1_15990_17361_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15990 - 17361

Intron Length:

1372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTTTTTGGT

5'SS Class:

weak_major

3'SS Sequence:

TGTTTTTTAGGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TGTTTTTTAGGA

Flanking Amino Acid:

FLQFLSPASPNIWAITLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.8

0.11

1.2

56.5

40.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

62.2

0.27

1.7

40.3

Minor 5ss

38.6

-1.3

3.1

50.5

40.3

Minor BPS

53.1

0.09

1.8

67.16

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026572

Chromosome:

PEDO01014848.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036172

15965 - 22185

6221