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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014857.1_1526_1620_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1526 - 1620

Intron Length:
95

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGGGGGCA

5'SS Class:
major

3'SS Sequence:
CCATGTCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTCAG

U12 Branch Point Sequence:
CCTTGCTCAGCC

Flanking Amino Acid:
INFLRQLYDEELRELQSQVS

Intron Amino Acid Position:
27

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.1
0.59
1
62.8
37.7

Major BPS
55.8
0.14
1.6
65.3
43.7

Major PPT
68.2
0.41
0.9
61.4
34.7

Minor 5ss
22.7
-3.1
3.4
29.2
43.6

Minor BPS
46
-0.3
2.2
58.11
46.7

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01014857.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 2083
2063

2 - 1698
1697