Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014890.1_471_1463_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

471 - 1463

Intron Length:

993

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCCAGGAAC

5'SS Class:

major

3'SS Sequence:

GCATCTCTCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGTCAT

U12 Branch Point Sequence:

TTCGTCATAAGC

Flanking Amino Acid:

PGSGQVQGADVLAIIRG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.2

67.9

40.1

Major BPS

72.2

0.55

1.2

73.6

41.8

Major PPT

71.4

0.48

0.9

64.5

36.4

Minor 5ss

17.2

-3.8

3.4

17.5

28.6

Minor BPS

48.1

-0.1

62.12

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027784

Chromosome:

PEDO01014890.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024561

448 - 2717

2270