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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014913.1_2158_2801_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2158 - 2801

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTCTCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

ATGTCCCCATGT

Flanking Amino Acid:

GGRLPHGTLQGRAPGDLLIR

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

72.4

0.5

0.8

65.9

30.2

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

42.5

-0.4

2.2

63.38

46.4

Associated Gene:

Gene:

VSIG8

Ensembl Gene ID:

ENSAPLG00000018508

Chromosome:

PEDO01014913.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039717

670 - 3775

3106