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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014960.1_620_1295_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

620 - 1295

Intron Length:

676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTGTC

5'SS Class:

major

3'SS Sequence:

TTTGAAATCGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

GCTCTTTGAAAT

Flanking Amino Acid:

DEAIVELEVSGAIIVTGSVE

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.2

72.1

39.4

Major BPS

74.8

0.62

39.8

Major PPT

0.2

1.1

58.1

Minor 5ss

32.2

-2

3.4

43.7

44.1

Minor BPS

49.2

0.02

1.5

63.94

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025517

Chromosome:

PEDO01014960.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018792

21 - 2380

2360