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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014966.1_2217_2306_R


Intron Information:

Intron Rank:
1

Intron Class:
major-like

Intron Phase:
2

Intron Coordinates:
2217 - 2306

Intron Length:
90

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACCGCCT

5'SS Class:
major

3'SS Sequence:
CCACCAACCCCAG|C

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
TCTTCAT

U12 Branch Point Sequence:
TCTCCACCAACC

Flanking Amino Acid:
ASLYRLAVSPSQESPAESFV

Intron Amino Acid Position:
309

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.7
0.37
1.3
58.1
46.4

Major BPS
87.4
0.93
0.9
87.9
29.5

Major PPT
58.3
0.19
0.9
47.5
34

Minor 5ss
37.9
-1.4
3.6
57.6
46.6

Minor BPS
46.1
-0.3
2.1
62.73
42.1

Associated Gene:

Gene:
MFSD5

Ensembl Gene ID:

Chromosome:
PEDO01014966.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1188 - 3280
2093