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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015020.1_3777_5300_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3777 - 5300

Intron Length:

1524

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCACCGAGC

5'SS Class:

major

3'SS Sequence:

CCTTTTTTGGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCGAAA

U12 Branch Point Sequence:

AATTGCCCAATT

Flanking Amino Acid:

VAALLRTSLRAKCSPTWVAD

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.2

67.2

40.9

Major BPS

48.1

-0.1

1.4

55.6

40.2

Major PPT

81.7

0.71

0.9

79.6

32.3

Minor 5ss

26.8

-2.7

4.2

43.1

44.1

Minor BPS

46.5

-0.1

2.2

68.88

41.9

Associated Gene:

Gene:

RECQL4

Ensembl Gene ID:

ENSAPLG00000020653

Chromosome:

PEDO01015020.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017665

449 - 6205

5757