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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015068.1_1224_1352_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1224 - 1352

Intron Length:
129

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTAGGTGCT

5'SS Class:
major

3'SS Sequence:
GCCTCTCTCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCCCAA

U12 Branch Point Sequence:
GCTTCCCAAGCC

Flanking Amino Acid:
FGFSSERSGSGSAGEALLST

Intron Amino Acid Position:
254

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.3
0.64
1.1
70.1
40.6

Major BPS
63.1
0.33
1.2
72.7
34.3

Major PPT
73.5
0.53
0.8
64.6
36.5

Minor 5ss
34.4
-1.8
3.5
50.4
46

Minor BPS
45.7
-0.3
2.2
59.79
45

Associated Gene:

Gene:
TEPSIN

Ensembl Gene ID:

Chromosome:
PEDO01015068.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

227 - 3543
3317

21 - 3543
3523

21 - 3543
3523