Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015068.1_156_253_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

156 - 253

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGAGCC

5'SS Class:

major

3'SS Sequence:

CCCCTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAG

U12 Branch Point Sequence:

CCCCGCTCAGCT

Flanking Amino Acid:

LQDPSDSVRMRSMCAISSLM

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

0.9

64.8

33.2

Major BPS

47.4

-0.1

1.6

54.7

43.1

Major PPT

70.9

0.47

0.7

64.7

23.9

Minor 5ss

26.4

-2.7

3.2

36.4

Minor BPS

41.3

-0.5

2.1

53.08

47.8

Associated Gene:

Gene:

TEPSIN

Ensembl Gene ID:

ENSAPLG00000026324

Chromosome:

PEDO01015068.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036447

21 - 3543

3523

ENSAPLT00000020414

21 - 3543

3523