Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015068.1_2612_2780_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2612 - 2780

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACGGGCC

5'SS Class:

major

3'SS Sequence:

TCCTCCCCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCCC

U12 Branch Point Sequence:

CCCTCCTCCCCC

Flanking Amino Acid:

LRDRLCFLSRLPVLLRGTAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

61.2

39.2

Major BPS

28.7

-1.3

4.1

59.2

39.1

Major PPT

0.58

0.7

73.2

Minor 5ss

-2.4

3.6

33.1

42.3

Minor BPS

34.9

-1.2

3.6

49.59

47.1

Associated Gene:

Gene:

TEPSIN

Ensembl Gene ID:

ENSAPLG00000026324

Chromosome:

PEDO01015068.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036447

21 - 3543

3523