Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015068.1_333_446_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

333 - 446

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

CCTTTTCACCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

CCCTTTTCACCA

Flanking Amino Acid:

SREEAQQFLKECGLLNCEVV

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

69.1

37.3

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

64.8

0.33

36.2

Minor 5ss

35.2

-1.7

3.2

41.6

38.8

Minor BPS

-0.3

1.8

49.67

42.5

Associated Gene:

Gene:

TEPSIN

Ensembl Gene ID:

ENSAPLG00000026324

Chromosome:

PEDO01015068.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044386

227 - 3543

3317

ENSAPLT00000036447

21 - 3543

3523

ENSAPLT00000024846

17 - 2590

2574