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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015083.1_4079_4839_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4079 - 4839

Intron Length:

761

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCTGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTATT

U12 Branch Point Sequence:

CCCTTCTGGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

39.4

-0.6

4.3

34.5

Major PPT

66.5

0.37

63.3

37.1

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

52.3

0.07

1.5

57.89

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021918

Chromosome:

PEDO01015083.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025598

3203 - 7570

4368