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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015129.1_299_774_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

299 - 774

Intron Length:

476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATCAGCA

5'SS Class:

weak_major

3'SS Sequence:

GCGAGAAGAGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCAAAT

U12 Branch Point Sequence:

AATGAATGAAAT

Flanking Amino Acid:

RSRCDQLEERFREKRIK

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.3

0.22

1.2

52.3

39.2

Major BPS

68.5

0.46

73.3

28.9

Major PPT

42.1

-0.4

1.1

34.5

Minor 5ss

41.9

-0.9

3.2

48.1

47.6

Minor BPS

43.2

-0.4

1.9

60.77

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019237

Chromosome:

PEDO01015129.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023856

278 - 1125

848