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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015135.1_1289_2698_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1289 - 2698

Intron Length:

1410

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTT|GCACATGAC

5'SS Class:

weak_major

3'SS Sequence:

ATGGCTGAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTAGAT

U12 Branch Point Sequence:

GATGGCTGAAAC

Flanking Amino Acid:

SKYLQGERDFALIKRGATSE

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.4

57.3

41.1

Major BPS

0.35

1.2

60.7

45.9

Major PPT

53.9

0.09

1.1

47.7

43.6

Minor 5ss

23.5

-3

4.2

38.9

41.4

Minor BPS

45.1

-0.3

54.78

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030623

Chromosome:

PEDO01015135.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022474

1232 - 6570

5339