Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015135.1_2395_2747_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2395 - 2747

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCAGGCTTT

5'SS Class:

major

3'SS Sequence:

ATCTTGTACGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

GTGTGCTTCATT

Flanking Amino Acid:

QSLSELQKGQGGCMWEQVYG

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.2

66.8

44.4

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

66.7

0.38

0.9

62.3

38.3

Minor 5ss

37.6

-1.4

4.4

55.1

49.1

Minor BPS

50.5

0.1

2.2

72.1

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030623

Chromosome:

PEDO01015135.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037972

2202 - 6570

4369