Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015161.1_263_341_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

263 - 341

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAT|GCGGGGCGG

5'SS Class:

major

3'SS Sequence:

TCTCCCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAG

U12 Branch Point Sequence:

CGCGCCTGAGCC

Flanking Amino Acid:

ISKVSRDTLY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.1

0.29

1.3

49.8

39.2

Major BPS

44.9

-0.3

1.6

42.9

Major PPT

75.5

0.57

0.7

69.5

24.3

Minor 5ss

15.4

-4

3.8

23.9

37.6

Minor BPS

46.2

-0.3

1.8

51.68

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027427

Chromosome:

PEDO01015161.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029209

261 - 756

496