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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015211.1_1266_1471_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1266 - 1471

Intron Length:

206

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCACCATGC

5'SS Class:

weak_major

3'SS Sequence:

TGTTCAGCTTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAATCAA

U12 Branch Point Sequence:

AATACAATAATC

Flanking Amino Acid:

EELHKVACGKTMTCFLGGPT

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.7

0.16

1.3

49.7

43.5

Major BPS

71.2

0.53

72.3

32.8

Major PPT

52.6

0.06

1.7

62.9

43.2

Minor 5ss

34.1

-1.8

4.2

49.9

44.6

Minor BPS

48.5

-0.1

1.9

61.63

36.8

Associated Gene:

Gene:

CALHM5

Ensembl Gene ID:

ENSAPLG00000010401

Chromosome:

PEDO01015211.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010821

785 - 1527

743