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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015278.1_4913_5149_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4913 - 5149

Intron Length:

237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTGCT

5'SS Class:

strong_major

3'SS Sequence:

AGTGCACCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

CCTCTCTGCAGT

Flanking Amino Acid:

LQSGLPWTGPSCGPGFRHRI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

35.1

Major BPS

74.1

0.6

66.7

39.9

Major PPT

60.1

0.23

48.4

40.1

Minor 5ss

34.3

-1.8

3.4

50.5

Minor BPS

42.2

-0.5

2.1

57.07

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021610

Chromosome:

PEDO01015278.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018374

1300 - 5306

4007