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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015282.1_2020_2120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2020 - 2120

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGGGA

5'SS Class:

major

3'SS Sequence:

GCCACGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CAGCCCCTGACT

Flanking Amino Acid:

RLIDYARMKKVCEEVKAYLL

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

60.3

40.6

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

60.4

0.23

0.9

49.4

39.2

Minor 5ss

22.1

-3.2

3.4

43.5

Minor BPS

51.8

0.14

1.7

66.54

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003905

Chromosome:

PEDO01015282.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004025

21 - 4042

4022