Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015305.1_902_1444_R

Intron Information:

Intron Rank:

144258

Intron Class:

major

Intron Phase:

Intron Coordinates:

902 - 1444

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCTGG

5'SS Class:

major

3'SS Sequence:

GCCCCCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

GCTCCCACACGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

56.7

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

64.8

0.33

0.8

56.7

27.3

Minor 5ss

36.4

-1.5

3.2

46.4

Minor BPS

37.9

-0.9

2.1

45.78

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024869

Chromosome:

PEDO01015305.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028345

21 - 1731

1711