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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015374.1_18689_21180_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
18689 - 21180

Intron Length:
2492

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTAAGCCCT

5'SS Class:
major

3'SS Sequence:
TCTTATCTCAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTTAC

U12 Branch Point Sequence:
AGTCTCTTATCT

Flanking Amino Acid:
RLVPTAFEKQGSAKLEKAEI

Intron Amino Acid Position:
210

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.3
0.67
1
69.1
41.8

Major BPS
78.8
0.71
0.9
69.7
37.1

Major PPT
70.2
0.46
1
70.7
33.5

Minor 5ss
42.2
-0.9
3.1
58.4
39.9

Minor BPS
61.9
0.45
1.6
76.55
39.6

Associated Gene:

Gene:
HEY2

Ensembl Gene ID:

Chromosome:
PEDO01015374.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13432 - 22783
9352