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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015374.1_21265_21370_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
21265 - 21370

Intron Length:
106

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTATGTTTT

5'SS Class:
strong_major

3'SS Sequence:
TTTTTGGGACTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTTAT

U12 Branch Point Sequence:
TATTTATAAACT

Flanking Amino Acid:
QIMARKKRRGIIEKRRRDRI

Intron Amino Acid Position:
182

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.4
0.74
1
80.5
35

Major BPS
88.7
0.96
0.8
78
36.5

Major PPT
64.6
0.33
1.1
59.3
46.1

Minor 5ss
56.3
0.21
2.4
67
44.2

Minor BPS
60.6
0.41
1.9
82.01
39.1

Associated Gene:

Gene:
HEY2

Ensembl Gene ID:

Chromosome:
PEDO01015374.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13432 - 22783
9352