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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015400.1_1353_1492_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

1353 - 1492

Intron Length:

140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGCG

5'SS Class:

major

3'SS Sequence:

GTTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TTGTGTTTCTCT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

61.3

42.1

Major BPS

0.87

0.8

85.6

Major PPT

86.7

0.83

0.8

81.1

30.9

Minor 5ss

31.2

-2.2

3.3

32.4

42.3

Minor BPS

38.6

-0.7

3.7

70.84

46.6

Associated Gene:

Gene:

AHDC1

Ensembl Gene ID:

ENSAPLG00000027176

Chromosome:

PEDO01015400.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039668

353 - 7124

6772